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io.github.genmnz/jean

io.github.genmnz/jean v1.0.1

Security Trust Score
Grade D · Weak posture
Tier 2 · Live endpointLow confidence · 21%
Declared MCP capabilities
ResourcesPrompts

This server scored D. Run it behind runtime policy enforcement so one bad tool call can't become an incident.

Security controls

Deterministic, evidence-backed. Score earned from passing controls; a failed guard caps it.

Model–MCP Runtime Guardrails

  • Pass
    Indirect Prompt Injection (IPI) Defensesguardno injection markers

    Tool/prompt/resource text is free of hidden instructions that could hijack the agent.

  • Pass
    User-in-the-Loop / Approval Scopeguardno destructive tool scope

    No over-broad or destructive tools (arbitrary shell, bulk-delete) that warrant human approval.

  • Not checked
    Strict JSON Schema Enforcementno source files

    Tool inputs are constrained (additionalProperties:false), so unexpected arguments can't be smuggled in.

  • Not checked
    In-Session Definition Integrityguardno source

    Tool and prompt definitions stay fixed during a session — they don't change after a few calls, which is how runtime-gated rug-pulls slip past one-time review.

  • N/A
    Tool Definition Integrityguardno prior version to diff

    Every consecutive version pair is diffed for new injection markers or destructive scope — a risky diff anywhere in history is a rug-pull (fail, durable); benign description drift warns.

Application Security Checks

  • Not checked
    No command-injection sinksguardno source

    Untrusted tool input reaching a shell yields remote code execution.

  • Not checked
    No dynamic code executionguardno source

    eval()/exec()/Function() on tool-derived strings allows arbitrary code execution.

  • Not checked
    No path traversalguardno source

    Naive path checks let tools read/write outside intended directories (EscapeRoute-class).

  • Not checked
    No SSRF sinksguardno source

    Fetching tool-supplied URLs can pivot into internal networks and metadata services.

  • Not checked
    No unsafe deserializationguardno source

    pickle/yaml.load/etc. on untrusted data can execute code.

  • Not checked
    No committed secretsguardno source

    Hardcoded keys/tokens in published source are live credentials an attacker can use.

  • Not checked
    Credentials sourced from environmentno source files

    Reading secrets from env/secret stores avoids hardcoding them.

  • Not checked
    Dependencies pinned (lockfile)no source files

    A lockfile makes installs reproducible and resistant to silent dependency swaps.

  • Not checked
    Actively maintainedno GitHub repository

    Unmaintained servers don't receive security fixes.

  • Not checked
    Repository not archivedguardno GitHub repository

    Archived repositories will never be patched.

  • Not checked
    Declares a licenseno GitHub repository

    A clear license is required for legal enterprise use.

  • Not checked
    Has a security policyno source files

    A SECURITY.md gives a private path to report vulnerabilities.

  • Not checked
    Signed releasesnot evaluated

    Signed releases let consumers verify artifacts weren't tampered with.

  • Not checked
    Adoption & popularityno adoption signal

    A small, capped nudge from stars/downloads — widely-used servers get more eyes on bugs. It can never offset a real security failure.

  • N/A
    No known-vulnerable dependenciesno dependencies to scan

    Runtime dependencies (parsed from the lockfile) are scanned against OSV.dev for published CVEs. Advisory: flagged dependencies lower the score but don't hard-cap it, since transitive reachability is unproven.

  • N/A
    No install/post-install scriptsguardno published package

    install hooks run arbitrary code on every consumer at install time.

  • N/A
    Package name not typosquattingguardno published package

    Names mimicking popular packages are a common malware delivery vector.

  • N/A
    Published with provenanceno published package

    Build provenance attests the artifact was built from the claimed source by CI.

  • N/A
    Established maintainerno published package

    Brand-new / single anonymous maintainers raise takeover and malware risk.

Transport & Trust Model

  • Warn
    IAM / Authentication Scopingno authentication handling detected

    OAuth 2.1 / Protected Resource Metadata gates who can invoke tools.

    Fix: Implement OAuth 2.1 with a .well-known/oauth-protected-resource document.

  • Pass
    Transport Encryption (TLS)guardall remotes use HTTPS

    Plaintext HTTP exposes traffic and bearer tokens to interception.

  • Not checked
    No Token Passthroughguardno source

    The client's token is never forwarded to downstream APIs — the server obtains its own, correctly-scoped credential instead.

  • Not checked
    DNS-Rebinding Protectionno source to inspect

    HTTP endpoints reject requests carrying an unlisted Origin, so a malicious web page can't drive the server through the user's browser.

  • Not checked
    Execution Sandboxingno source files

    A container/sandbox image limits blast radius; a server that runs natively has full host access.

  • Not checked
    Network Exposureno source files

    Binding 0.0.0.0 or exposing debug inspectors widens the attack surface.

  • N/A
    Live Endpoint Reachablenot dynamically scanned

    A dynamic scan connected to the declared remote endpoint and it responded — verified live, not a dead URL.

  • N/A
    Authentication Enforced (live)not dynamically scanned

    If the server declares auth is required, it must actually reject anonymous clients. Serving tools to unauthenticated callers is a real exposure.

Tools (289)

call_cqdot_plotdraw_gelfold_rnaread_mgfdraw_treeebi_alignfind_orfsmap_readsread_mzmlrecombinescore_rbsalign_readbuild_treecheck_rowsdesign_rbsdraw_tracefold_guidefusion_pcrgc_contentload_tracepick_firsttrim_readstrim_tracecheck_valueexport_treelist_tracesload_recordlookup_genepcr_amplifyverify_readblast_searchbootstrap_cqexport_tracefetch_recordfilter_itemsgenotype_pcalist_librarylist_sampleslookup_omicsmelt_profilepeptide_massprimer_checkrun_gel_lanerun_workflowauto_annotatebrowse_regioncompare_treesdot_plot_gridfragment_ionsgate_dropletsget_selectionmask_sequencemultiplex_pcrquantify_dpcrread_rdml_runrps_blast_cddrun_gel_platescreen_guidesaudit_barcodesback_translatedesign_codehopdesign_primersdraw_alignmentexport_map_svginfer_proteinslist_databaseslookup_proteinlookup_variantmiqe_checklistpopulation_fstprotein_digestquery_databaserank_tradeoffsread_structurescore_spectrumsearch_recordssize_fragmentssummarize_rowstransform_treeactivity_cliffsalign_sequencesannotate_regionassemble_operoncalculate_powercopy_number_lohdesign_barcodesexport_barcodesfind_assembliesfind_star_sitesget_open_recordgibson_assemblelookup_clinicallookup_compoundlookup_ontologynumber_antibodyplan_next_toolsprotein_profilerank_next_testsrank_strategiesrps_blast_smarttree_statisticsalignment_windowantibody_isotypecheck_index_poolcheck_invariantscodon_optimalitycopy_number_readdigest_fragmentsdomesticate_partfind_primer_snpshistory_protocolisotope_envelopeligate_fragmentslist_experimentsprotein_disorderprotein_topologyrpstblastn_smartscaffold_networkscan_motif_sitestrace_raw_signalverify_constructadopt_trace_callsantibody_moleculecheck_assay_decayclassify_dropletscluster_moleculescodon_table_fetchcompare_moleculesdelta_blast_smartdemultiplex_readsdesign_free_codesdesign_hcr_probesdesign_ish_probesdesign_qpcr_assayenzyme_collectionenzyme_cut_countshumanize_antibodyoptimize_sequencerecord_experimentscan_splice_sitessearch_literaturevalidate_workflowapply_feature_fileapply_variant_callcanonical_tautomerdecompose_r_groupsdesign_split_sitesdetect_trace_indelenumerate_reactionfind_linear_motifsmap_chemical_spacemap_reaction_atomsprotein_propertiesread_sequencing_qcread_variant_callsrecord_compositionrestriction_ligatereverse_complementsearch_off_targetssurvey_off_targetstranslate_sequencealignment_agreementanalyze_melt_curvescancel_research_runcheck_color_balancecheck_scorpion_stemcopy_number_comparecopy_number_regionscopy_number_segmentcopy_number_somaticcrispr_score_deephfdesign_lamp_primersdesign_overhang_setdesign_primer_pairsdiscover_flag_ratesgene_set_enrichmentgenerate_conformersgraft_antibody_cdrsmelting_temperaturenotebook_cross_refspopulation_ancestryrelative_expressionresearch_run_statusresume_research_runvalidate_gene_traitantibody_liabilitiesbuild_ena_submissioncodon_usage_analysiscodon_usage_distancecopy_number_findingscrispr_design_guidesestimate_effect_sizegolden_gate_assembleisotopic_compositionlist_sgrna_scaffoldslookup_residue_sitesrank_reference_genesscan_protein_domainsscore_variant_effectscreen_contaminationtarget_decoy_qvaluestide_quantify_indelsvariant_call_summaryassemble_index_oligosassess_small_moleculeaudit_cds_annotationsbuild_addgene_depositbuild_assembly_reportcall_bases_from_traceclassify_grammar_partcompare_constructionsconsensus_from_tracescopy_number_mosaicismcrispr_analyze_screencrispr_design_librarycrispr_quantify_editsdesign_gibson_primersdesign_padlock_probespopulation_site_statspropagate_uncertaintyquantify_base_editingsimulate_taqman_curveassembly_plan_simulatecalculate_rnaseq_powerdesign_genetic_circuitfind_restriction_siteslinkage_disequilibriummatch_part_by_sequenceplan_rnaseq_experimentprotein_signal_peptidesave_enzyme_collectionscan_sigma70_promotersscreen_oligo_structuretree_taxon_annotationsblast_project_sequencescheck_golden_gate_partscheck_manufacturabilitycheck_methylation_blockcrispr_score_deepspcas9design_knockout_packagedifferential_expressiondiscover_codon_outliersdiscover_site_avoidancelist_workflow_templatesmatched_molecular_pairsrecompute_trace_qualityremember_lab_preferencerun_discovery_programmescore_overhang_fidelityscreen_molecule_libraryscrub_restriction_sitessearch_molecule_librarywrite_structure_librarybuild_genbank_submissioncheck_primer_specificitycopy_number_allele_splitdesign_bisulfite_primersdesign_multisite_primersdesign_oligo_plate_orderget_construction_historyprotein_membrane_profileread_structure_consensusrestore_trace_file_callsantibody_antigen_contactsdescribe_discovery_corpusdesign_degenerate_primersdesign_saturation_primersdesign_sequencing_primersplan_thermocycler_programselect_substitution_modelbayesian_protein_inferencecompare_reads_to_referencedesign_expression_variantsdesign_fusion_site_primersdesign_mutagenesis_primersdigest_reaction_conditionsdiscover_target_validationdiscover_tree_incongruenceexport_construction_recordscan_intrinsic_terminatorscall_mixed_bases_from_tracegene_set_overrepresentationdiscover_reference_stabilityenumerate_protonation_statesprotein_disorder_metapredictdiscover_gene_tree_discordancediscover_reference_concordancediscover_annotation_contradictions